The Stylet

Diversity and Systematics of Acoela and Nemertodermatida

28S-300F/L1642 20090806

Basic information

Date: 
Wed, 2009-08-05 22:00
Gene: 
Template: 
dna
Associated reaction(s): 
Specimens: 

Procedure

PCR cocktail: 
Component Volume (ul) Mix (ul)
Forward primer  0.5  
Reversed primer  0.5  
Buffer    
MgCl2    
dNTPs    
Taq    
DNA (if nested)  2  
ddH2O
 22  
Total volume  25
Forward primer(s): 
Thermal cycling (abbreviated): 
95ºC@4min, 1x(94ºC@30sec, 57-53ºC@30sec, 72ºC@30sec),28x(94ºC@30sec, 52ºC@30sec, 72ºC@60sec),72ºC@10min
Thermal cycling: 
Step Comment Cycles Time (sec) Temperature (°C)
Initialization For DNA polymerases that need hot-start heat activation 1
 
Denaturation DNA melting producing single-stranded DNA 1 240  95
Amplification   1 -  -
Denaturation DNA melting producing single-stranded DNA
 - 30  94
Annealing The primer binds to the template  - 30  57-53
Extension The DNA polymerase synthesizes new DNA  - 30  72
Amplification    28    
Denaturation DNA melting producing single-stranded DNA    30 94
Annealing The primer binds to the template   30  52
Extension he DNA polymerase synthesizes new DNA   60  72
Final elongation Any remaining single-stranded DNA is extended 1 600 72 
Final hold Short-term storage 1 -  12
Reversed primer(s): 
File attachments: 
Products and Equipment: 

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Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith